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Education: Degrees

Master of Science

in Mathematics

2021

Master of Science

in Biology

2018

Bachelor of Science

in Biology, Biochemistry, and Mathematics

2014

Associates of Arts

in Arabic

2009

Education: Degrees in Progress

Master of Science

in Data Science

2026

Graduate Certificate

in Data Science

2025

Graduate Certificate

in Machine Learning

2026

Education: Certification

Professional Certificates in

  • Applied Data Analytics

  • Data Analysis: Absolute Beginners  
  • Data Analysis: Essential Skills  

  • Introduction to Computer Science

  • Microsoft Excel Fundamentals  

  • Microsoft Excel for the Data Analyst

  • Quantum 101

Specializations in

  • AI Foundations for Everyone
  • AI Engineering

  • Biostatistics in Public Health

  • ​Data Science Foundations: Statistical Inference

  • Deep Learning 

  • Genomic Data Science

  • Machine Learning

  • Mathematics for Machine Learning

  • Statistical Analysis with R for Public Health

  • TensorFlow: Data and Deployment

  • TensorFlow in Practice

Learning Tracks in

  • Importing & Cleaning Data with R

  • Unsupervised Machine Learning in R

  • Understanding Data Topics

Professional Experience

Part-Time Lecturer                                                                                                                                                                                                         Ypsilanti, MI USA

Eastern Michigan University, Biology Department                                                                                                                                             08/2025 – Present

  • Delivering undergraduate/graduate-level lectures in Plant Evolution & Classification

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Senior Data Scientist (Imaging)                                                                                                                                                                            Little Rock, AR, USA

Arkana Laboratories, Multiplex Imaging Center                                                                                                                                                 04/2022 – 07/2025

  • Developed and trained convolutional neural networks (CNNs) using TensorFlow, Keras and Halo AI for tissue segmentation of renal biopsy images

  • Applied spatial statistics and unsupervised clustering to analyze leukocyte phenotypes using R and Halo

  • Conducted statistical analysis and developed predictive models for disease risks, leveraging R packages such as caret, e1071, survival, and aorsf

  • Analyzed RNA expression profiles to find early indicators of disease using Bioconductor and nSolver; identifying genes-of-interest for qPCR assays and targeted drug therapies

  • Created frontend apps for tissue adequacy and kidney allocation risk assessments using Shiny and Android Studio

​

Private Data Science Tutor                                                                                                                                                                                                              Virtual

Wyzant                                                                                                                                                                                                                             04/2020 – Present

  • Delivered 420 hours of tutoring in R programming and mathematics, focusing on statistics, matrix calculus, and machine learning techniques

  • Debugged and guided R code programming for undergraduate projects, graduate thesis research, and professional industry research​

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Contract Data Scientist                                                                                                                                                                             Virtual & Ann Arbor, MI USA

Upwork and independent contracts                                                                                                                                                              07/2019 – Present

  • Built and optimized predictive models for stock market analysis and sports projections using R and machine learning algorithms

  • Analyzed and cleaned datasets using the Tidyverse, VBA macros, and Excel for various projects, including nanosensor data analysis and engineering optimization

  • Developed statistical reports and visualizations using ggplot2, plotly, and Power BI to present insights to clients

​

Graduate Researcher & Graduate Teaching Associate                                                                                                                                     Ypsilanti, MI, USA

Eastern Michigan University, Mathematics Department                                                                                                                           09/2018 – 04/2021

  • Conducted thesis research on the mathematics of Rubik’s Cubes using R, TensorFlow, and Keras for solving combinatorial puzzles through neural networks

  • Used Markovian analysis, group theory, and cloud-based neural networks to analyze the lattice structure of permutation groups and efficiency in solutions 

  • Tutored 1200+ hours of undergraduate mathematics courses with emphasis on calculus, statistics, linear algebra, and proofs

​

Graduate Researcher & Graduate Teaching Associate                                                                                                                                      Orlando, FL, USA

University of Central Florida, Biology Department, Savage Lab                                                                                                             08/2015 – 04/2018

  • Conducted thesis research on the spatial statistics and behavioral ecology of Gopher Tortoises (Gopherus polyphemus) using ArcGIS and R for geospatial analysis

  • Leveraged cloud computing and SSH protocols for simulation of 9.6 million movement patterns and theoretical spatial statistical analysis of homing behavior

  • Drew blood and used histopathologic staining to phenotype white blood cells and characterize immune response in Gopher Tortoises

  • Taught two semesters of Evolutionary Biology laboratory and assisted in single semesters of Genetics and Vertebrate Evolution & Ecology

​​

Undergraduate Researcher                                                                                                                                                                                        Ypsilanti, MI, USA

Eastern Michigan University, Chemistry Department, Holmes Labs                                                                                                        04/2013 – 12/2014

  • Investigated proviral integration rates of the Feline Leukemia Virus (FeLV) using qPCR and biochemical assays

  • Conducted DNA extraction, gel electrophoresis, restrictive digestion, and PCR as part of molecular biology lab protocols

  • Designed primer & probe sequences using BLAST for PCR and restriction digestion

​

Airborne Cryptologic Linguist                                                                                                                                                   Omaha, NE, USA & Qatar, Doha

United States Air Force, Offutt AFB & Al Udeid AB                                                                                                                                     09/2005 – 08/2011

  • Flew 97 intelligence-gathering missions, providing tactical translations and analysis of Arabic communications and applying decryption algorithms to electronic communications

  • Utilized VBA macros and geospatial software to acquire and locate targets of interest

  • Served as a non-commissioned officer, supervising and training over 30 airmen in language translation and intelligence reporting

  • Regularly conducted intelligence gathering simulations, serving as a subject matter expert and certifying agent in tactical Arabic & Quick Reaction Capabilities

  • Collaborated with analysts and commanders to develop actionable intelligence briefs based on geospatial data and linguistic interpretations​

Skills: Technologies

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Skills: Science & Mathematics

Statistics

Bayesian Statistics

Circular Statistics

Inferential Statistics

Nonparametric Statistics

Parametric Statistics

Spatial Statistics

Tests of Correlation

Tests of Difference

Tests of Independence

Tests of Normality

Tests of Heteroscedasticity

Researcher & Teacher

Curriculum Design

Critical Thinking

Data Management

Experimental Design

Grant Writing

Graphical Design

Leadership

Project Management

Public Speaking 

Teaching & Training

Technical Writing

Modeling

Anomaly Detection

Autoregression

Dimensionality Reduction

Feature Selection

Generalized Linear Models

Kernel Methods

Multiple Regression

Regularization

Smoothing Methods

Survival Analysis

Time Series & Forecasting

Mathematics

Combinatorics

Complex & Real Analysis

Cryptanalysis

Differential Equations

Fourier Analysis

Geospatial Analysis

Group & Galois Theory

Linear Algebra

Matrix Calculus

Multivariate Calculus

Quantum Mechanics

Machine Learning

Autoencoders & Hopfield Networks

Convolutional Neural Networks

Ensemble & Transfer Learning

Generative Networks

Genetic & Evolutionary Algorithms

Markov Chains Monte Carlo

Natural Language Processing

Random & Gradient Boosted Forests

Recurrent Neural Networks

TensorFlow & Keras

Unsupervised Clustering

Chemistry

Chemical Purification

Chromatography

Computational Chemistry

Organic Synthesis

Molecular Orbital Theory

Quantitative Analysis

Quantum Theory

Spectrometric Analysis

Spectroscopic Theory 

Thermodynamic Theory

Unknown Determination

Data & Computer Science

Algorithm Design

App Development

Data Analysis

Data Visualization

Data Wrangling

Ethical Hacking

Functional Programming

Linux, MacOS, and Windows

Neural Network Deployment

Parallel Programming

Statistical Programming

Biology

Camera & Flap Trapping

Cell Culturing

Differential Gene Expression Analysis

Gel Electrophoresis

Restriction Digestion

Species Identification: Angiosperms

Species Identification: Arachnids

Species Identification: Herpetofauna

Tissue and Cell Segmentation

Transformation & Transfection

Quantitative Polymerase Chain Reaction

Research

Research Publications

  • Eigbire-Molen, O. J., Cassol, C. A., Kenan, D. J., Napier, J. O. H., Burdine, L. J., Coley, S. M., & Sharma, S. G. (2024) Smartphone-based machine learning model for real-time assessment of medical kidney biopsy. Journal of Pathology Informatics, 100385.

  • Zhang, H., Haun, R. S., Collin, F., Cassol, C., Napier, J. O. H., Wilson, J., ... & Coley, S. M. (2023). Development and Validation of a Multi-Class Model Defining Molecular Archetypes of Kidney Transplant Rejection: A Large Cohort Study of the Banff Human Organ Transplant Gene Expression Panel. Laboratory Investigation, 100304.

  • Napier, J. O. H. (2021). Connectivity of combination puzzles: Using machine learning on groups. (Order No. 28412993) [Master’s thesis, Eastern Michigan University]. ProQuest Dissertations & Theses Global.

  • Napier, J. O. H. (2018). Behavioral and Disease Ecology of Gopher Tortoises (Gopherus polyphemus) Post Exclusion and Relocation with a Novel Approach to Homing Determination. (Publication No. 6381) [Master’s Thesis, University of Central Florida] STARS Electronic Theses and Dissertations.

Research Presentations & Posters

  • Napier, J. O. H., Stephens, O. W., Cassol, C., Daly, R., Hamilton, G. DiFranza, L., Mohan, S., & Coley, S. M. (2024). What Do You Call Treatment Resistant T-cell Mediated Rejection? [Poster Presentation, Banff-PITOR Joint Meeting 2024].

  • Napier, J. O. H., Caza, T. N., Campbell, D. L., & Coley, S. M. (2024). Prediction of Delayed Graft Function Risk Using Donor and Recipient Characteristics. [Rapid Fire Oral Presentation, American Transplant Congress 2024].

  • Stephens, O. W., Napier, J. O. H., Burdine, M. S., & Coley, S. M. (2024) Potential Role for T-Cell Intrinsic DNA Repair in Human Kidney Transplant Rejection. [Poster Presentation, American Transplant Congress 2024].

  • Coley, S. M., Stephens, O. W., & Napier, J. O. H. (2024) Impact of Autoimmune History on the Transcriptional Profile of Kidney Allograft Rejection. [Rapid Fire Oral Presentation, American Transplant Congress 2024].

  • Stephens O. W., Napier, J. O. H., Coley, S. M. (2023) Transcriptional Heterogeneity of T-Cell Mediated Rejection in Human Kidney Transplantation. [Rapid Fire Oral Presentation, American Transplant Congress 2023].

  • Eigbire-Molen, O. J., Cassol, C. A., Coley, S. M., Kenan, D. J., Napier, J. O. H., & Sharma, S. G. (2023) Machine Learning Classification of Kidney Biopsy Smartphone Images for Adequacy Assessment. [Poster Presentation, American Society of Nephology 2023].

  • Eigbire-Molen, O. J., Napier, J. O. H., Coley, S. M., & Caza, T. N. (2023) Post- transplant Outcomes of Patients with End-Stage Renal Disease Caused by Lupus Nephritis. [Poster Presentation, United States and Canadian Academy of Pathology 2023].

Professional Memberships

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Alpha Chi Sigma

2015

American Chemical Society

2012

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American Society for

Cell Biology

2015

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American Society for

Microbiology

2013

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Michigan Society

of Herpetologists

2013

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TriBeta National Biology Honor Society

2014

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Starfleet International Fan Association 

2015

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American Statistical Association 

2023

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Mathematical Association of America

2013

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